Progesterone Analysis Service

Creative Proteomics specializes in high-precision progesterone and metabolite analysis using advanced LC-MS/MS platforms. We provide quantitative and pathway-level insights across diverse biological matrices to support endocrine research, toxicology studies, and systems biology. Our service delivers reproducible, low-CV data with full transparency—empowering researchers to decode hormonal dynamics with confidence.

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What is Progesterone?

Progesterone is a naturally occurring C21 steroid hormone synthesized primarily in the corpus luteum of the ovaries, as well as in the adrenal glands and placenta. It is structurally defined by a cyclopentanoperhydrophenanthrene backbone, featuring a ketone group at C3 and a double bond between C4 and C5.

Functionally, progesterone plays a central role in regulating reproductive and endocrine physiology. In mammals, it is essential for establishing uterine receptivity, supporting embryo implantation, and maintaining pregnancy by inhibiting myometrial contractions. Beyond its reproductive functions, progesterone contributes to neuroendocrine regulation, immune modulation, and transcriptional control through binding to nuclear progesterone receptors (PR-A and PR-B isoforms).

Progesterone also acts as a metabolic precursor in steroid biosynthesis, giving rise to hormones such as cortisol, aldosterone, and estrogens via enzymatic conversion in the steroidogenic pathway. Interestingly, its presence has also been reported in plants (e.g., Vitex agnus-castus) and marine organisms, underscoring its evolutionary conservation across biological kingdoms.

Progesterone Analysis Service Offered by Creative Proteomics

  • Progesterone Quantification: Measurement of progesterone concentrations in various biological samples including plasma, serum, urine, and saliva.
  • Progesterone Metabolite Profiling: Identification and quantification of progesterone metabolites in serum, urine, and other fluids, utilizing advanced LC-MS/MS methods.
  • Hormonal Disruption Studies: Analysis of progesterone levels in the context of exposure to environmental toxins, pharmaceuticals, or endocrine-disrupting chemicals.
  • Pharmacokinetic Studies: Measurement of progesterone concentration over time in drug development or clinical trial settings to assess the pharmacodynamics of progesterone analogs or treatments.
  • Metabolic Pathway Analysis: Mapping of progesterone's metabolic pathways and its interaction with other hormones like estrogen, cortisol, and testosterone.

List of Detected Progesterone and Related Metabolites

MetaboliteDescriptionDetection Method
PregnanediolPrimary urinary metabolite of progesterone, used as a biomarker for luteal functionLC-MS/MS
17α-HydroxyprogesteroneIntermediate in adrenal steroidogenesis, commonly studied in endocrine researchLC-MS/MS
AllopregnanoloneNeuroactive steroid influencing GABA-A receptor activity; key in neuroendocrinologyLC-MS/MS
PregnenolonePrecursor molecule in the steroid hormone biosynthesis pathwayLC-MS/MS
5α-DihydroprogesteronePeripheral metabolite with implications in uterine and neurological pathwaysLC-MS/MS
Progesterone sulfateSulfated form of progesterone; part of phase II metabolismLC-MS/MS
AndrostenedioneIntermediate in androgen and estrogen biosynthesis; cross-pathway relevanceLC-MS/MS
CorticosteroneGlucocorticoid precursor involved in adrenal hormone pathwaysLC-MS/MS
20α-DihydroprogesteroneInactive metabolite formed via reduction; indicates progesterone deactivationLC-MS/MS
11-Deoxycorticosterone (DOC)Mineralocorticoid precursor derived from progesterone metabolismLC-MS/MS
Dehydroepiandrosterone (DHEA)Key precursor in both androgen and estrogen pathways; intersects with progesterone metabolismLC-MS/MS
CortisolMajor stress hormone synthesized downstream from progesteroneLC-MS/MS
Estrone (E1)Primary estrogen metabolite; part of hormone balance analysis alongside progesteroneLC-MS/MS
3α,5α-Tetrahydroprogesterone (THP)Allopregnanolone precursor; exhibits potent neurosteroid effectsLC-MS/MS
3β,5α-TetrahydroprogesteroneIsomer of THP with differing receptor activity in the nervous systemLC-MS/MS
17β-EstradiolPrincipal estrogen involved in reproductive hormone balanceLC-MS/MS
AndrosteroneAndrogen metabolite; reflects interplay between androgen and progesterone pathwaysLC-MS/MS

Advantages of Progesterone Assay

  • Precision & Reproducibility: All quantifications are performed with a coefficient of variation (CV) below 10%, ensuring high reliability and reproducibility of data across replicates and sample batches.
  • Superior Sensitivity: Utilizing UHPLC-MS/MS technology, our platform achieves detection limits as low as 0.09 μg/L for 8-OHdG and 0.04 μg/L for related oxidative DNA damage metabolites—enabling detection even in trace-level samples.
  • High Throughput Metabolomics Integration: Capable of simultaneous profiling of over 500 endogenous metabolites, including oxidized nucleotides, base excision repair intermediates, and purine metabolism products—ideal for systems biology and oxidative stress network analysis.
  • Matrix Versatility: Our methods are validated across a comprehensive range of biological matrices.
  • Internal Standard Normalization: All quantifications employ stable isotope-labeled internal standards, significantly improving data accuracy and compensating for matrix effects.
  • End-to-End Data Transparency: All results are reported with raw chromatograms, standard curves, and quantification metrics for full scientific traceability.

Workflow for Progesterone Analysis Service

Progesterone Analysis Process

Technology Platform for Plasmalogen Analysis Service

Thermo Fisher Q Exactive

Thermo Fisher Q Exactive (Figure from Thermo Fisher)

SCIEX Triple Quad™ 6500+

SCIEX Triple Quad™ 6500+ (Figure from Sciex)

7890B Gas Chromatograph + 5977 Single Quadrupole

Agilent 7890B-5977B (Figure from Agilent)

Sample Requirements for Progesterone Analysis Service

Sample TypeRequired VolumeStorage ConditionNotes
Serum≥ 100 µL-80°CAvoid repeated freeze-thaw cycles
Plasma (EDTA/Heparin)≥ 100 µL-80°CCentrifuge immediately after collection
Urine≥ 500 µL-80°C or -20°C (short-term)First morning urine preferred for hormone studies
Saliva≥ 500 µL-20°CCollect using validated saliva collection kits
Tissue≥ 50 mgSnap frozen in liquid nitrogen; store at -80°CProvide tissue type and treatment details
Cell Lysate≥ 100 µL-80°CInclude total protein concentration if available
CSF (Cerebrospinal Fluid)≥ 100 µL-80°CFor neurosteroid analysis applications
Cultured Media≥ 1 mL-20°C or -80°CSerum-free media recommended to avoid interference

Applications of Progesterone Assay Service

Endocrine Disruption Research

Analyze progesterone fluctuations in response to environmental toxins, endocrine-disrupting chemicals (EDCs), and xenobiotics in toxicology studies.

Reproductive Biology and Fertility Studies (Non-Clinical)

Investigate progesterone's regulatory role in ovulation cycles, implantation models, and reproductive physiology in animal or in vitro systems.

Steroidogenesis Pathway Mapping

Quantify progesterone alongside other steroid intermediates to study the regulation and flux of steroid hormone biosynthesis pathways.

Neurosteroid Research and Brain-Gut Axis Studies

Explore the impact of progesterone and its metabolites (e.g., allopregnanolone) on neuronal function, stress response, and neuroendocrine signaling.

Agricultural and Veterinary Research

Measure progesterone levels in livestock and animal models to monitor hormonal changes related to estrus cycles and reproductive management.

Pharmacokinetic and Hormonal Compound Evaluation

Assess the absorption, distribution, and metabolic behavior of progesterone or progesterone-modulating compounds in preclinical models.

Demo

APPI mass spectrum of progesterone showing a peak at m/z 315 and its molecular structure; MS/MS spectrum displays fragment ions at m/z 109 and 123 for quantification.

(A) Representative APPI mass spectrum of methanolic progesterone (P4), with the protonated molecular ion [P4 + H]+ at m/z 315. Inset shows the molecular structure of P4. (B) APPI-MS/MS spectrum of [P4 + H]+ (m/z 315), highlighting major fragment ions at m/z 109 and 123, used for P4 quantification via LC-MS/MS (Fernandes et al., 2011).

Chromatograms showing the selectivity of the liquid chromatography coupled to tandem mass spectrometry (LC-MS/MS) method for progesterone (P4) quantitation.

Chromatograms showing the selectivity of the liquid chromatography coupled to tandem mass spectrometry (LC-MS/MS) method for progesterone (P4) quantitation. (A) A blank plasma extraction and (B) a plasma extract that contains P4 and medroxyprogesterone 17-acetate (MPA) at the limit of quantitation (LOQ) are represented (Fernandes et al., 2011).

FAQ of Progesterone Analysis Service

Can your platform distinguish progesterone from isobaric compounds (e.g., 17α-hydroxyprogesterone)?

Yes. We use compound-specific MRM transitions and chromatographic separation (C18 column, 1.8 µm, 2.1×100 mm). For example, progesterone (315.3 → 97.1 m/z) and 17α-hydroxyprogesterone (331.3 → 109.1 m/z) elute with >1.2 min retention time separation under our standard LC gradient.

What internal standards are used in quantification?

We employ stable isotope-labeled standards such as progesterone-d9 and allopregnanolone-d4 to ensure accurate normalization. These correct for matrix suppression and extraction efficiency across diverse sample types.

Can Creative Proteomics support time-course or dose-response studies?

Absolutely. Our analytical pipeline supports high-throughput profiling with robust inter-run consistency (CV <7%). Batch-to-batch comparability is ensured through the use of pooled QC samples and shared calibration curves.

Is metabolite stability during storage a concern?

Yes, particularly in biological fluids. We recommend storing samples at -80°C and avoiding >2 freeze-thaw cycles. For sensitive metabolites (e.g., tetrahydroprogesterones), sample stabilization with BHT or immediate extraction is advisable.

Can you perform absolute quantification with standard curves?

Yes. Quantification is achieved using external standard curves with 5–8 concentration points, fitted by linear regression (R² > 0.998). Calibration curves are matrix-matched wherever possible.

Do you offer metabolite pathway visualization or statistical analysis?

Yes. For multi-group studies, we offer optional bioinformatics services, including PCA, heatmaps, and pathway enrichment visualization (KEGG/SMPDB) to contextualize progesterone and its metabolites in broader biological networks.

Can I analyze progesterone metabolites from archived FFPE tissues?

Yes, with limitations. While steroid recovery is lower than in frozen tissues, we have optimized extraction protocols using deparaffinization and LC-compatible solvents. Please consult us before submission for sample-specific guidance.

Do you support non-targeted detection of unknown steroid metabolites?

Yes. Using high-resolution Orbitrap LC-MS (Q Exactive™), we provide untargeted steroid profiling and post-acquisition data mining (mzCloud, MassBank) for novel compound annotation.

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Progesterone Analysis Service Case Study

Publications

Here are some publications in Metabolomics research from our clients:

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Reference

  1. Fernandes, R. M. T., et al. "LC-MS/MS quantitation of plasma progesterone in cattle." Theriogenology 76.7 (2011): 1266-1274. https://doi.org/10.1016/j.theriogenology.2011.05.033

Metabolomics Sample Submission Guidelines

Download our Metabolomics Sample Preparation Guide for essential instructions on proper sample collection, storage, and transport for optimal experimental results. The guide covers various sample types, including tissues, serum, urine, and cells, along with quantity requirements for untargeted and targeted metabolomics.

Metabolomics Sample Submission Guidelines
* For Research Use Only. Not for use in diagnostic procedures.
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